Index

A

ari() (in module stereoAlign.metrics)

B

bbknn_alignment() (in module stereoAlign.alignment)

C

combat_alignment() (in module stereoAlign.alignment)

D

desc_alignment() (in module stereoAlign.alignment)

G

graph_connectivity() (in module stereoAlign.metrics)

H

harmony_alignment() (in module stereoAlign.alignment)

hvg_batch() (in module stereoAlign.preprocessing) hvg_intersect() (in module stereoAlign.preprocessing)

K

kbet() (in module stereoAlign.metrics)

L

lisi() (in module stereoAlign.metrics)

M

mnn_alignment() (in module stereoAlign.alignment)

module stereoAlign.preprocessing

N

norma_log() (in module stereoAlign.preprocessing)

R

reduce_data() (in module stereoAlign.preprocessing)

S

scale_batch() (in module stereoAlign.preprocessing) scalex_alignment() (in module stereoAlign.alignment) scanorama_alignment() (in module stereoAlign.alignment) scgen_alignment() (in module stereoAlign.alignment) scvi_alignment() (in module stereoAlign.alignment)

silhouette() (in module stereoAlign.metrics) silhouette_batch() (in module stereoAlign.metrics) spatialign_alignment() (in module stereoAlign.alignment) stereoAlign.preprocessing module summarize_counts() (in module stereoAlign.preprocessing)